cmisspetsc Module Reference

This module is a CMISS buffer module to the PETSc library. More...

Data Types
interface	ISColoringDestroy
interface	ISDestroy
interface	ISLocalToGlobalMappingApply
interface	ISLocalToGlobalMappingApplyIS
interface	ISLocalToGlobalMappingCreate
interface	ISLocalToGlobalMappingDestroy
interface	KSPCreate
interface	KSPDestroy
interface	KSPGetConvergedReason
interface	KSPGetIterationNumber
interface	KSPGetPC
interface	KSPGetResidualNorm
interface	KSPGMRESSetRestart
interface	KSPSetFromOptions
interface	KSPSetInitialGuessNonzero
interface	KSPSetOperators
interface	KSPSetReusePreconditioner
interface	KSPSetTolerances
interface	KSPSetType
interface	KSPSetUp
interface	KSPSolve
interface	MatAssemblyBegin
interface	MatAssemblyEnd
interface	MatColoringApply
interface	MatColoringCreate
interface	MatColoringDestroy
interface	MatColoringSetFromOptions
interface	MatColoringSetType
interface	MatCreate
interface	MatCreateAIJ
interface	MatCreateDense
interface	MatCreateSeqAIJ
interface	MatCreateSeqDense
interface	MatDenseGetArrayF90
interface	MatDenseRestoreArrayF90
interface	MatDestroy
interface	MatFDColoringCreate
interface	MatFDColoringDestroy
interface	MatFDColoringSetFromOptions
interface	MatFDColoringSetFunction
interface	MatFDColoringSetParameters
interface	MatFDColoringSetUp
interface	MatGetInfo
interface	MatGetOwnershipRange
interface	MatGetRow
interface	MatGetValues
interface	MatMumpsSetCntl
interface	MatMumpsSetIcntl
interface	MatRestoreRow
interface	MatSeqAIJGetArrayF90
interface	MatSeqAIJGetMaxRowNonzeros
interface	MatSeqAIJRestoreArrayF90
interface	MatSetLocalToGlobalMapping
interface	MatSetOption
interface	MatSetSizes
interface	MatSetType
interface	MatSetValue
interface	MatSetValueLocal
interface	MatSetValues
interface	MatSetValuesLocal
interface	MatView
interface	MatZeroEntries
interface	PCFactorGetMatrix
interface	PCFactorSetMatSolverPackage
interface	PCFactorSetUpMatSolverPackage
interface	PCSetFromOptions
interface	PCSetReusePreconditioner
interface	PCSetType
interface	petsc_snesgetjacobian
interface	petsc_snessetjacobian
interface	PetscFinalize
interface	PetscInitialize
interface	PetscLogView
interface	PetscPopSignalHandler
interface	SNESCreate
interface	SNESDestroy
interface	SNESGetApplicationContext
interface	SNESGetConvergedReason
interface	SNESGetFunction
interface	SNESGetIterationNumber
interface	SNESGetJacobian
interface	SNESGetKSP
interface	SNESGetLineSearch
interface	SNESGetSolutionUpdate
interface	SNESLineSearchBTSetAlpha
interface	SnesLineSearchComputeNorms
interface	SnesLineSearchGetNorms
interface	SNESLineSearchGetVecs
interface	SNESLineSearchSetComputeNorms
interface	SnesLineSearchSetMonitor
interface	SnesLineSearchSetNorms
interface	SNESLineSearchSetOrder
interface	SNESLineSearchSetTolerances
interface	SNESLineSearchSetType
interface	SNESMonitorSet
interface	SNESQNSetRestartType
interface	SNESQNSetScaleType
interface	SNESQNSetType
interface	SNESSetApplicationContext
interface	SNESSetConvergenceTest
interface	SNESSetFromOptions
interface	SNESSetFunction
interface	SNESSetJacobian
interface	SNESSetKSP
interface	SNESSetNormSchedule
interface	SNESSetTolerances
interface	SNESSetTrustRegionTolerance
interface	SNESSetType
interface	SNESSolve
interface	TSCreate
interface	TSDestroy
interface	TSGetSolution
interface	TSMonitorSet
interface	TSSetDuration
interface	TSSetExactFinalTime
interface	TSSetFromOptions
interface	TSSetInitialTimeStep
interface	TSSetProblemType
interface	TSSetRHSFunction
interface	TSSetSolution
interface	TSSetTimeStep
interface	TSSetType
interface	TSSolve
interface	TSStep
interface	TSSundialsSetTolerance
interface	TSSundialsSetType
interface	VecAssemblyBegin
interface	VecAssemblyEnd
interface	VecCopy
interface	VecCreate
interface	VecCreateGhost
interface	VecCreateGhostWithArray
interface	VecCreateMPI
interface	VecCreateMPIWithArray
interface	VecCreateSeq
interface	VecCreateSeqWithArray
interface	VecDestroy
interface	VecDot
interface	VecDuplicate
interface	VecGetArrayF90
interface	VecGetArrayReadF90
interface	VecGetLocalSize
interface	VecGetOwnershipRange
interface	VecGetSize
interface	VecGetValues
interface	VecGhostGetLocalForm
interface	VecGhostRestoreLocalForm
interface	VecGhostUpdateBegin
interface	VecGhostUpdateEnd
interface	VecNorm
interface	VecRestoreArrayF90
interface	VecRestoreArrayReadF90
interface	VecScale
interface	VecSet
interface	VecSetFromOptions
interface	VecSetLocalToGlobalMapping
interface	VecSetSizes
interface	VecSetValues
interface	VecSetValuesLocal
interface	VecView

Functions/Subroutines
subroutine, public	petsc_errorhandlingsetoff (err, error,)
	Set PETSc error handling on. More...
subroutine, public	petsc_errorhandlingseton (err, error,)
	Set PETSc error handling on. More...
subroutine, public	petsc_finalise (err, error,)
	Buffer routine to the PETSc PetscFinalize routine. More...
subroutine, public	petsc_initialise (file, err, error,)
	Buffer routine to the PETSc PetscInitialize routine. More...
subroutine, public	petsc_logview (viewer, err, error,)
	Buffer routine to the PETSc PetscLogView routine. More...
subroutine, public	petsc_isfinalise (is, err, error,)
subroutine, public	petsc_isinitialise (is, err, error,)
subroutine, public	petsc_isdestroy (is, err, error,)
	Buffer routine to the PETSc ISDestroy routine. More...
subroutine, public	petsc_iscoloringfinalise (iscoloring, err, error,)
subroutine, public	petsc_iscoloringinitialise (iscoloring, err, error,)
subroutine, public	petsc_iscoloringdestroy (iscoloring, err, error,)
	Buffer routine to the PETSc ISColoringDestroy routine. More...
subroutine, public	petsc_islocaltoglobalmappingfinalise (isLocalToGlobalMapping, err, error,)
subroutine, public	petsc_islocaltoglobalmappinginitialise (isLocalToGlobalMapping, err, error,)
subroutine, public	petsc_islocaltoglobalmappingapply (isLocalToGlobalMapping, n, idxIn, idxOut, err, error,)
	Buffer routine to the PETSc ISLocalToGlobalMappingApply routine. More...
subroutine, public	petsc_islocaltoglobalmappingapplyis (isLocalToGlobalMapping, isIn, isOut, err, error,)
	Buffer routine to the PETSc ISLocalToGlobalMappingApplyIS routine. More...
subroutine, public	petsc_islocaltoglobalmappingcreate (communicator, blockSize, n, indices, mode, isLocalToGlobalMapping, err, error,)
	Buffer routine to the PETSc ISLocalToGlobalMappingCreate routine. More...
subroutine, public	petsc_islocaltoglobalmappingdestroy (isLocalToGlobalMapping, err, error,)
	Buffer routine to the PETSc ISLocalToGlobalMappingDestroy routine. More...
subroutine, public	petsc_kspfinalise (ksp, err, error,)
	Finalise the PETSc KSP structure and destroy the KSP. More...
subroutine, public	petsc_kspinitialise (ksp, err, error,)
	Initialise the PETSc KSP structure. More...
subroutine, public	petsc_kspcreate (communicator, ksp, err, error,)
	Buffer routine to the PETSc KSPCreate routine. More...
subroutine, public	petsc_kspdestroy (ksp, err, error,)
	Buffer routine to the PETSc KSPDestroy routine. More...
subroutine, public	petsc_kspgetconvergedreason (ksp, reason, err, error,)
	Buffer routine to the PETSc KSPGetConvergedReason routine. More...
subroutine, public	petsc_kspgetiterationnumber (ksp, iterationNumber, err, error,)
	Buffer routine to the PETSc KSPGetIterationNumber routine. More...
subroutine, public	petsc_kspgetpc (ksp, pc, err, error,)
	Buffer routine to the PETSc KSPGetPC routine. More...
subroutine, public	petsc_kspgetresidualnorm (ksp, residualNorm, err, error,)
	Buffer routine to the PETSc KSPGetResidualNorm routine. More...
subroutine, public	petsc_kspgmressetrestart (ksp, restart, err, error,)
	Buffer routine to the PETSc KSPGMRESSetRestart routine. More...
subroutine, public	petsc_kspsetfromoptions (ksp, err, error,)
	Buffer routine to the PETSc KSPSetFromOptions routine. More...
subroutine, public	petsc_kspsetinitialguessnonzero (ksp, flag, err, error,)
	Buffer routine to the PETSc KSPSetInitialGuessNonzero routine. More...
subroutine, public	petsc_kspsetoperators (ksp, amat, pmat, err, error,)
	Buffer routine to the PETSc KSPSetOperators routine. More...
subroutine, public	petsc_kspsetreusepreconditioner (ksp, flag, err, error,)
	Buffer routine to the PETSc KSPSetReusePreconditioner routine. More...
subroutine, public	petsc_kspsettolerances (ksp, rTol, aTol, dTol, maxIterations, err, error,)
	Buffer routine to the PETSc KSPSetTolerances routine. More...
subroutine, public	petsc_kspsettype (ksp, method, err, error,)
	Buffer routine to the PETSc KSPSetType routine. More...
subroutine, public	petsc_kspsetup (ksp, err, error,)
	Buffer routine to the PETSc KSPSetUp routine. More...
subroutine, public	petsc_kspsolve (ksp, b, x, err, error,)
	Buffer routine to the PETSc KSPSolve routine. More...
subroutine, public	petsc_matfinalise (a, err, error,)
subroutine, public	petsc_matinitialise (a, err, error,)
subroutine, public	petsc_matassemblybegin (A, assemblyType, err, error,)
	Buffer routine to the PETSc MatAssemblyBegin routine. More...
subroutine, public	petsc_matassemblyend (A, assemblyType, err, error,)
	Buffer routine to the PETSc MatAssemblyEnd routine. More...
subroutine, public	petsc_matcreate (communicator, A, err, error,)
	Buffer routine to the PETSc MatCreate routine. More...
subroutine, public	petsc_matcreateaij (communicator, localM, localN, globalM, globalN, diagNumberNonZerosPerRow, diagNumberNonZerosEachRow, offDiagNumberNonZerosPerRow, offDiagNumberNonZerosEachRow, a, err, error,)
	Buffer routine to the PETSc MatCreateAIJ routine. More...
subroutine, public	petsc_matcreatedense (communicator, localM, localN, globalM, globalN, matrixData, a, err, error,)
	Buffer routine to the PETSc MatCreateDense routine. More...
subroutine, public	petsc_matcreateseqaij (communicator, m, n, numberNonZerosPerRow, numberNonZerosEachRow, a, err, error,)
	Buffer routine to the PETSc MatCreateSeqAIJ routine. More...
subroutine, public	petsc_matcreateseqdense (communicator, m, n, matrixData, a, err, error,)
	Buffer routine to the PETSc MatCreateSeqDense routine. More...
subroutine, public	petsc_matdensegetarrayf90 (a, array, err, error,)
	Buffer routine to the PETSc MatDenseGetArrayF90 routine. More...
subroutine, public	petsc_matdenserestorearrayf90 (a, array, err, error,)
	Buffer routine to the PETSc MatDenseRestoreArrayF90 routine. More...
subroutine, public	petsc_matdestroy (a, err, error,)
	Buffer routine to the PETSc MatDestroy routine. More...
subroutine, public	petsc_matgetinfo (a, flag, info, err, error,)
	Buffer routine to the PETSc MatGetInfo routine. More...
subroutine, public	petsc_matgetownershiprange (a, firstRow, lastRow, err, error,)
	Buffer routine to the PETSc MatGetOwnershipRange routine. More...
subroutine, public	petsc_matgetrow (A, rowNumber, numberOfColumns, columns, values, err, error,)
	Buffer routine to the PETSc MatGetRow routine. More...
subroutine, public	petsc_matgetvalues (a, m, mIndices, n, nIndices, values, err, error,)
	Buffer routine to the PETSc MatGetValues routine. More...
subroutine, public	petsc_matmumpsseticntl (factoredMatrix, icntl, ival, err, error,)
	Buffer routine to the PETSc MatMumpsSetIcntl routine. More...
subroutine, public	petsc_matmumpssetcntl (factoredMatrix, icntl, val, err, error,)
	Buffer routine to the PETSc MatMumpsSetCntl routine. More...
subroutine, public	petsc_matrestorerow (A, rowNumber, numberOfColumns, columns, values, err, error,)
	Buffer routine to the PETSc MatRestoreRow routine. More...
subroutine, public	petsc_matseqaijgetarrayf90 (a, array, err, error,)
	Buffer routine to the PETSc MatSeqAIJGetArrayF90 routine. More...
subroutine, public	petsc_matseqaijgetmaxrownonzeros (a, maxNumberNonZeros, err, error,)
	Buffer routine to the PETSc MatSeqAIJGetMaxRowNonzeros routine. More...
subroutine, public	petsc_matseqaijrestorearrayf90 (a, array, err, error,)
	Buffer routine to the PETSc MatSeqAIJRestoreArrayF90 routine. More...
subroutine, public	petsc_matsetlocaltoglobalmapping (a, isLocalToGlobalMapping, err, error,)
	Buffer routine to the PETSc MatSetLocalToGlobalMapping routine. More...
subroutine, public	petsc_matsetoption (a, option, flag, err, error,)
	Buffer routine to the PETSc MatSetOption routine. More...
subroutine, public	petsc_matsetsizes (a, localM, localN, globalM, globalN, err, error,)
	Buffer routine to the PETSc MatSetSizes routine. More...
subroutine	petsc_matsettype (a, matrixType, err, error,)
	Buffer routine to the PETSc MatSetType routine. More...
subroutine, public	petsc_matsetvalue (a, row, col, value, insertMode, err, error,)
	Buffer routine to the PETSc MatSetValue routine. More...
subroutine, public	petsc_matsetvalues (a, m, mIndices, n, nIndices, values, insertMode, err, error,)
	Buffer routine to the PETSc MatSetValues routine. More...
subroutine, public	petsc_matsetvaluelocal (a, row, col, VALUE, insertMode, err, error,)
	Buffer routine to the PETSc MatSetValueLocal routine. More...
subroutine, public	petsc_matsetvalueslocal (a, m, mIndices, n, nIndices, values, insertMode, err, error,)
	Buffer routine to the PETSc MatSetValuesLocal routine. More...
subroutine, public	petsc_matview (a, viewer, err, error,)
	Buffer routine to the PETSc MatView routine. More...
subroutine, public	petsc_matzeroentries (a, err, error,)
	Buffer routine to the PETSc MatZeroEntries routine. More...
subroutine, public	petsc_matcoloringfinalise (matColoring, err, error,)
subroutine, public	petsc_matcoloringinitialise (matColoring, err, error,)
subroutine, public	petsc_matcoloringapply (matColoring, isColoring, err, error,)
	Buffer routine to the PETSc MatColoringApply routine. More...
subroutine, public	petsc_matcoloringcreate (a, matColoring, err, error,)
	Buffer routine to the PETSc MatColoringCreate routine. More...
subroutine, public	petsc_matcoloringdestroy (matColoring, err, error,)
	Buffer routine to the PETSc MatColoringDestroy routine. More...
subroutine, public	petsc_matcoloringsetfromoptions (matColoring, err, error,)
	Buffer routine to the PETSc MatColoringSetFromOptions routine. More...
subroutine, public	petsc_matcoloringsettype (matColoring, coloringType, err, error,)
	Buffer routine to the PETSc MatColoringSetType routine. More...
subroutine, public	petsc_matfdcoloringfinalise (matFDColoring, err, error,)
subroutine, public	petsc_matfdcoloringinitialise (matFDColoring, err, error,)
subroutine, public	petsc_matfdcoloringcreate (a, isColoring, matFDColoring, err, error,)
	Buffer routine to the PETSc MatFDColoringCreate routine. More...
subroutine, public	petsc_matfdcoloringdestroy (matFDColoring, err, error,)
	Buffer routine to the PETSc MatFDColoringDestroy routine. More...
subroutine, public	petsc_matfdcoloringsetfromoptions (matFDColoring, err, error,)
	Buffer routine to the PETSc MatFDColoringSetFromOptions routine. More...
subroutine, public	petsc_matfdcoloringsetparameters (matFDColoring, rError, uMin, err, error,)
	Buffer routine to the PETSc MatFDColoringSetParameters routine. More...
subroutine, public	petsc_matfdcoloringsetfunction (matFDColoring, fFunction, ctx, err, error,)
	Buffer routine to the PETSc MatFDColoringSetFunction routine. More...
subroutine, public	petsc_matfdcoloringsetup (a, isColoring, matFDColoring, err, error,)
	Buffer routine to the PETSc MatFDColoringSetup routine. More...
subroutine, public	petsc_pcfinalise (pc, err, error,)
subroutine, public	petsc_pcinitialise (pc, err, error,)
subroutine, public	petsc_pcfactorgetmatrix (pc, factoredMatrix, err, error,)
	Buffer routine to the PETSc PCFactorGetMatrix routine. More...
subroutine, public	petsc_pcfactorsetmatsolverpackage (pc, solverPackage, err, error,)
	Buffer routine to the PETSc PCFactoSetMatSolverPackage routine. More...
subroutine, public	petsc_pcfactorsetupmatsolverpackage (pc, err, error,)
	Buffer routine to the PETSc PCFactorSetUpMatSolverPackage routine. More...
subroutine, public	petsc_pcsetreusepreconditioner (pc, flag, err, error,)
	Buffer routine to the PETSc PCSetReusePreconditioner routine. More...
subroutine, public	petsc_pcsetfromoptions (pc, err, error,)
	Buffer routine to the PETSc PCSetFromOptions routine. More...
subroutine, public	petsc_pcsettype (pc, method, err, error,)
	Buffer routine to the PETSc PCSetType routine. More...
subroutine, public	petsc_snesfinalise (snes, err, error,)
subroutine, public	petsc_snesinitialise (snes, err, error,)
subroutine, public	petsc_snescomputejacobiandefault (snes, x, j, b, ctx, err, error,)
	Buffer routine to the PETSc SNESComputeJacobianDefault routine. More...
subroutine, public	petsc_snescomputejacobiandefaultcolor (snes, x, j, b, ctx, err, error,)
	Buffer routine to the PETSc SNESComputeJacobianDefaultColor routine. More...
subroutine, public	petsc_snescreate (communicator, snes, err, error,)
	Buffer routine to the PETSc SNESCreate routine. More...
subroutine, public	petsc_snesdestroy (snes, err, error,)
	Buffer routine to the PETSc SNESDestroy routine. More...
subroutine, public	petsc_snesgetapplicationcontext (snes, ctx, err, error,)
	Buffer routine to the PETSc SNESGetApplicationContext routine. More...
subroutine, public	petsc_snesgetconvergedreason (snes, reason, err, error,)
	Buffer routine to the PETSc SNESGetConvergedReason routine. More...
subroutine, public	petsc_snesgetfunction (snes, f, err, error,)
	Buffer routine to the PETSc SNESGetFunction routine. More...
subroutine, public	petsc_snesgetiterationnumber (snes, iterationNumber, err, error,)
	Buffer routine to the PETSc SNESGetIterationNumber routine. More...
subroutine	petsc_snesgetjacobiansolver (snes, a, b, jFunction, err, error,)
	Buffer routine to the PETSc SNESSetJacobian routine for solver contexts. More...
subroutine	petsc_snesgetjacobianspecial (snes, a, err, error,)
	Buffer routine to the PETSc SNESSetJacobian routine for solver contexts. More...
subroutine, public	petsc_snesgetksp (snes, ksp, err, error,)
	Buffer routine to the PETSc SNESGetKSP routine. More...
subroutine, public	petsc_snesgetlinesearch (snes, lineSearch, err, error,)
	Buffer routine to the PETSc SNESGetLineSearch routine. More...
subroutine, public	petsc_snesgetsolutionupdate (snes, solutionUpdate, err, error,)
	Buffer routine to the PETSC SNESGetSolutionUpdate routine. More...
subroutine, public	petsc_snesmonitorset (snes, mFunction, ctx, err, error,)
	Buffer routine to the PETSc SNESMonitorSet routine. More...
subroutine, public	petsc_snesqnsetrestarttype (snes, rType, err, error,)
	Buffer routine to the PETSc SNESQNSetRestartType routine. More...
subroutine, public	petsc_snesqnsetscaletype (snes, sType, err, error,)
	Buffer routine to the PETSc SNESQNSetScaleType routine. More...
subroutine, public	petsc_snesqnsettype (snes, qType, err, error,)
	Buffer routine to the PETSc SNESQNSetType routine. More...
subroutine, public	petsc_snessetapplicationcontext (snes, ctx, err, error,)
	Buffer routine to the PETSc SNESSetApplicationContext routine. More...
subroutine, public	petsc_snessetconvergencetest (snes, cFunction, ctx, err, error,)
	Buffer routine to the PETSc SNESSetFunction routine. More...
subroutine, public	petsc_snessetfromoptions (snes, err, error,)
	Buffer routine to the PETSc SNESSetFromOptions routine. More...
subroutine, public	petsc_snessetfunction (snes, f, fFunction, ctx, err, error,)
	Buffer routine to the PETSc SNESSetFunction routine. More...
subroutine	petsc_snessetjacobianmatfdcoloring (snes, a, b, jFunction, ctx, err, error,)
	Buffer routine to the PETSc SNESSetJacobian routine for MatFDColoring contexts. More...
subroutine	petsc_snessetjacobiansolver (snes, a, b, jFunction, ctx, err, error,)
	Buffer routine to the PETSc SNESSetJacobian routine for solver contexts. More...
subroutine, public	petsc_snessetksp (snes, ksp, err, error,)
	Buffer routine to the PETSc SNESGetKSP routine. More...
subroutine, public	petsc_snessetnormschedule (snes, normSchedule, err, error,)
	Buffer routine to the PETSc SNESSetNormSchedule routine. More...
subroutine, public	petsc_snessettolerances (snes, absTol, rTol, sTol, maxIterations, maxFunctionEvals, err, error,)
	Buffer routine to the PETSc SNESSetTolerances routine. More...
subroutine, public	petsc_snessettrustregiontolerance (snes, trTol, err, error,)
	Buffer routine to the PETSc SNESSetTrustRegionTolerance routine. More...
subroutine, public	petsc_snessettype (snes, method, err, error,)
	Buffer routine to the PETSc SNESSetType routine. More...
subroutine, public	petsc_snessolve (snes, b, x, err, error,)
	Buffer routine to the PETSc SNESSolve routine. More...
subroutine, public	petsc_sneslinesearchfinalise (lineSearch, err, error,)
subroutine, public	petsc_sneslinesearchinitialise (lineSearch, err, error,)
subroutine, public	petsc_sneslinesearchbtsetalpha (lineSearch, alpha, err, error,)
	Buffer routine to the PETSc SNESLineSearchBTSetAlpha routine. More...
subroutine, public	petsc_sneslinesearchcomputenorms (lineSearch, err, error,)
	Buffer routine to the PETSc SNESLineSearchComputeNorms routine. More...
subroutine, public	petsc_sneslinesearchgetnorms (lineSearch, xNorm, fNorm, yNorm, err, error,)
	Buffer routine to the petsc SnesLineSearchGetNorms routine. More...
subroutine, public	petsc_sneslinesearchgetvecs (lineSearch, x, f, y, w, g, err, error,)
	Buffer routine to the PETSc SNESLineSearchGetVecs routine. More...
subroutine, public	petsc_sneslinesearchsetcomputenorms (lineSearch, computeNorms, err, error,)
	Buffer routine to the PETSc SNESLineSearchSetComputeNorms routine. More...
subroutine, public	petsc_sneslinesearchsetmonitor (lineSearch, monitorLinesearch, err, error,)
	Buffer routine to the PETSc SNESLineSearchSetMonitor routine. More...
subroutine, public	petsc_sneslinesearchsetnorms (snes, xNorm, fNorm, yNorm, err, error,)
	Buffer routine to the petsc SnesLineSearchSetNorms routine. More...
subroutine, public	petsc_sneslinesearchsetorder (lineSearch, lineSearchOrder, err, error,)
	Buffer routine to the PETSc SNESLineSearchSetOrder routine. More...
subroutine, public	petsc_sneslinesearchsettolerances (lineSearch, steptol, maxstep, rtol, atol, ltol, maxIt, err, error,)
	Buffer routine to the PETSc SNESLineSearchSetTolerances routine. More...
subroutine, public	petsc_sneslinesearchsettype (lineSearch, lineSearchType, err, error,)
	Buffer routine to the PETSc SNESLineSearchSetType routine. More...
subroutine, public	petsc_tsfinalise (ts, err, error,)
subroutine, public	petsc_tsinitialise (ts, err, error,)
subroutine, public	petsc_tscreate (communicator, ts, err, error,)
	Buffer routine to the PETSc TSCreate routine. More...
subroutine, public	petsc_tsdestroy (ts, err, error,)
	Buffer routine to the PETSc TSDestroy routine. More...
subroutine, public	petsc_tsgetsolution (ts, currentSolution, err, error,)
	Buffer routine to the PETSc TSGetSolution routine. More...
subroutine, public	petsc_tsmonitorset (ts, mFunction, ctx, err, error,)
	Buffer routine to the PETSc TSMonitorSet routine. More...
subroutine, public	petsc_tssetduration (ts, maxSteps, maxTime, err, error,)
	Buffer routine to the PETSc TSSetDuration routine. More...
subroutine, public	petsc_tssetexactfinaltime (ts, exactFinalTime, err, error,)
	Buffer routine to the PETSc TSSetExactFinalTime routine. More...
subroutine, public	petsc_tssetfromoptions (ts, err, error,)
	Buffer routine to the PETSc TSSetFromOptions routine. More...
subroutine, public	petsc_tssetinitialtimestep (ts, initialTime, timeStep, err, error,)
	Buffer routine to the PETSc TSSetInitialTimeStep routine. More...
subroutine, public	petsc_tssetproblemtype (ts, probType, err, error,)
	Buffer routine to the PETSc TSSetProblemType routine. More...
subroutine, public	petsc_tssetrhsfunction (ts, rates, rhsFunction, ctx, err, error,)
	Buffer routine to the PETSc TSSetRHSFunction routine. More...
subroutine, public	petsc_tssetsolution (ts, initialSolution, err, error,)
	Buffer routine to the PETSc TSSetSolution routine. More...
subroutine, public	petsc_tssettimestep (ts, timeStep, err, error,)
	Buffer routine to the PETSc TSSetTimeStep routine. More...
subroutine, public	petsc_tssettype (ts, method, err, error,)
	Buffer routine to the PETSc TSSetType routine. More...
subroutine, public	petsc_tssolve (ts, x, finalTime, err, error,)
	Buffer routine to the PETSc TSSolve routine. More...
subroutine, public	petsc_tsstep (ts, steps, pTime, err, error,)
	Buffer routine to the PETSc TSStep routine. More...
subroutine, public	petsc_tssundialssettype (ts, sundialsType, err, error,)
	Buffer routine to the PETSc TSSundialsSetType routine. More...
subroutine, public	petsc_tssundialssettolerance (ts, absTol, relTol, err, error,)
	Buffer routine to the PETSc TSSundialsSetTolerance routine. More...
subroutine, public	petsc_vecfinalise (x, err, error,)
subroutine, public	petsc_vecinitialise (x, err, error,)
subroutine, public	petsc_vecassemblybegin (x, err, error,)
	Buffer routine to the PETSc VecAssemblyBegin routine. More...
subroutine, public	petsc_vecassemblyend (x, err, error,)
	Buffer routine to the PETSc VecAssemblyEnd routine. More...
subroutine, public	petsc_veccopy (x, y, err, error,)
	Buffer routine to the PETSc VecCopy routine. More...
subroutine, public	petsc_veccreate (communicator, x, err, error,)
	Buffer routine to the PETSc VecCreate routine. More...
subroutine, public	petsc_veccreateghost (communicator, localN, globalN, numGhosts, ghosts, x, err, error,)
	Buffer routine to the PETSc VecCreateGhost routine. More...
subroutine, public	petsc_veccreateghostwitharray (communicator, localN, globalN, numGhosts, ghosts, array, x, err, error,)
	Buffer routine to the PETSc VecCreateGhostWithArray routine. More...
subroutine, public	petsc_veccreatempi (communicator, localN, globalN, x, err, error,)
	Buffer routine to the PETSc VecCreateMPI routine. More...
subroutine, public	petsc_veccreatempiwitharray (communicator, localN, globalN, array, x, err, error,)
	Buffer routine to the PETSc VecCreateMPIWithArray routine. More...
subroutine, public	petsc_veccreateseq (communicator, n, x, err, error,)
	Buffer routine to the PETSc VecCreateSeq routine. More...
subroutine, public	petsc_veccreateseqwitharray (communicator, n, array, x, err, error,)
	Buffer routine to the PETSc VecCreateSeqWithArray routine. More...
subroutine, public	petsc_vecdestroy (x, err, error,)
	Buffer routine to the PETSc VecDestroy routine. More...
subroutine, public	petsc_vecduplicate (x, y, err, error,)
	Buffer routine to the PETSc VecDuplicate routine. More...
subroutine, public	petsc_vecdot (x, y, dotProduct, err, error,)
	Buffer routine to the PETSc VecDot routine. More...
subroutine, public	petsc_vecgetarrayf90 (x, array, err, error,)
	Buffer routine to the PETSc VecGetArrayF90 routine. More...
subroutine, public	petsc_vecgetarrayreadf90 (x, array, err, error,)
	Buffer routine to the PETSc VecGetArrayReadF90 routine. More...
subroutine, public	petsc_vecgetlocalsize (x, n, err, error,)
	Buffer routine to the PETSc VecGetLocalSize routine. More...
subroutine, public	petsc_vecgetownershiprange (x, low, high, err, error,)
	Buffer routine to the PETSc VecGetOwnershipRange routine. More...
subroutine, public	petsc_vecgetsize (x, n, err, error,)
	Buffer routine to the PETSc VecGetSize routine. More...
subroutine, public	petsc_vecgetvalues (x, n, indices, values, err, error,)
	Buffer routine to the PETSc VecGetValues routine. More...
subroutine	petsc_vecghostgetlocalform (g, l, err, error,)
	Buffer routine to the PETSc VecGhostGetLocalForm routine. More...
subroutine	petsc_vecghostrestorelocalform (g, l, err, error,)
	Buffer routine to the PETSc VecGhostRestoreLocalForm routine. More...
subroutine	petsc_vecghostupdatebegin (x, insertMode, scatterMode, err, error,)
	Buffer routine to the PETSc VecGhostUpdateBegin routine. More...
subroutine	petsc_vecghostupdateend (x, insertMode, scatterMode, err, error,)
	Buffer routine to the PETSc VecGhostUpdateEnd routine. More...
subroutine, public	petsc_vecnorm (x, normType, norm, err, error,)
	Buffer routine to the PETSc VecNorm routine. More...
subroutine, public	petsc_vecrestorearrayf90 (x, array, err, error,)
	Buffer routine to the PETSc VecRestoreArrayF90 routine. More...
subroutine, public	petsc_vecrestorearrayreadf90 (x, array, err, error,)
	Buffer routine to the PETSc VecRestoreArrayReadF90 routine. More...
subroutine, public	petsc_vecscale (x, alpha, err, error,)
	Buffer routine to the PETSc VecScale routine. More...
subroutine, public	petsc_vecset (x, VALUE, err, error,)
	Buffer routine to the PETSc VecSet routine. More...
subroutine, public	petsc_vecsetfromoptions (x, err, error,)
	Buffer routine to the PETSc VecSetFromOptions routine. More...
subroutine, public	petsc_vecsetlocaltoglobalmapping (x, isLocalToGlobalMapping, err, error,)
	Buffer routine to the PETSc VecSetLocalToGlobalMapping routine. More...
subroutine, public	petsc_vecsetsizes (x, localN, globalN, err, error,)
	Buffer routine to the PETSc VecSetSizes routine. More...
subroutine, public	petsc_vecsetvalues (x, n, indices, values, insertMode, err, error,)
	Buffer routine to the PETSc VecSetValues routine. More...
subroutine	petsc_setvalueslocal (x, n, indices, values, insertMode, err, error,)
	Buffer routine to the PETSc VecSetValuesLocal routine. More...
subroutine, public	petsc_vecview (x, viewer, err, error,)
	Buffer routine to the PETSc VecView routine. More...

Variables
logical, save	petschandleerror

Detailed Description

This module is a CMISS buffer module to the PETSc library.

Function/Subroutine Documentation

subroutine, public cmisspetsc::petsc_errorhandlingsetoff	(	integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Set PETSc error handling on.

Parameters

[out]	err	The error code
[out]	error	The error string

Definition at line 1732 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_errorhandlingseton	(	integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Set PETSc error handling on.

Parameters

[out]	err	The error code
[out]	error	The error string

Definition at line 1755 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_finalise	(	integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PetscFinalize routine.

Parameters

[out]	err	The error code
[out]	error	The error string

Definition at line 1777 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by comp_environment::computational_environment_finalise().

subroutine, public cmisspetsc::petsc_initialise	(	character(len=*), intent(in)	file,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PetscInitialize routine.

Parameters

[in]	file	Filename for PETSc options file
[out]	err	The error code
[out]	error	The error string

Definition at line 1806 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by comp_environment::computational_environment_initialise().

subroutine, public cmisspetsc::petsc_iscoloringdestroy	(	type(petsciscoloringtype), intent(inout)	iscoloring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc ISColoringDestroy routine.

Parameters

[in,out]	iscoloring	The index set coloring
[out]	err	The error code
[out]	error	The error string

Definition at line 2007 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_iscoloringfinalise().

subroutine, public cmisspetsc::petsc_iscoloringfinalise	(	type(petsciscoloringtype), intent(inout)	iscoloring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	iscoloring	The ISColoring to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 1957 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_iscoloringdestroy().

subroutine, public cmisspetsc::petsc_iscoloringinitialise	(	type(petsciscoloringtype), intent(inout)	iscoloring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	iscoloring	The ISColoring to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 1983 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_isdestroy	(	type(petscistype), intent(inout)	is,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc ISDestroy routine.

Parameters

[in,out]	is	The index set
[out]	err	The error code
[out]	error	The error string

Definition at line 1925 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_isfinalise().

subroutine, public cmisspetsc::petsc_isfinalise	(	type(petscistype), intent(inout)	is,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	is	The IS to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 1875 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_isdestroy().

subroutine, public cmisspetsc::petsc_isinitialise	(	type(petscistype), intent(inout)	is,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	is	The IS to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 1901 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_islocaltoglobalmappingapply	(	type(petscislocaltogloabalmappingtype), intent(inout)	isLocalToGlobalMapping,
		integer(intg), intent(in)	n,
		integer(intg), dimension(:), intent(in)	idxIn,
		integer(intg), dimension(:), intent(out)	idxOut,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc ISLocalToGlobalMappingApply routine.

Parameters

[in,out]	islocaltoglobalmapping	The local to global mapping to apply
[in]	n	The number of indicies
[out]	err	The error code
[out]	error	The error string

Definition at line 2088 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_islocaltoglobalmappingapplyis	(	type(petscislocaltogloabalmappingtype), intent(in)	isLocalToGlobalMapping,
		type(petscistype), intent(in)	isIn,
		type(petscistype), intent(out)	isOut,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc ISLocalToGlobalMappingApplyIS routine.

Parameters

[in]	islocaltoglobalmapping	The local to global mapping to apply
[out]	err	The error code
[out]	error	The error string

Definition at line 2122 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_islocaltoglobalmappingcreate	(	intent(in)	communicator,
		integer(intg), intent(in)	blockSize,
		integer(intg), intent(in)	n,
		integer(intg), dimension(:), intent(in)	indices,
		intent(in)	mode,
		type(petscislocaltogloabalmappingtype), intent(inout)	isLocalToGlobalMapping,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc ISLocalToGlobalMappingCreate routine.

Parameters

[in]	blocksize	The block size
[in]	n	The number of local indices divided by the block size (or the number of block indices)
[in]	indices	The global index for each local element
[in,out]	islocaltoglobalmapping	On exit, the local to global mapping context
[out]	err	The error code
[out]	error	The error string

Definition at line 2154 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_islocaltoglobalmappingdestroy	(	type(petscislocaltogloabalmappingtype), intent(inout)	isLocalToGlobalMapping,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc ISLocalToGlobalMappingDestroy routine.

Parameters

[in,out]	islocaltoglobalmapping	The local to global mapping context
[out]	err	The error code
[out]	error	The error string

Definition at line 2189 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_islocaltoglobalmappingfinalise().

subroutine, public cmisspetsc::petsc_islocaltoglobalmappingfinalise	(	type(petscislocaltogloabalmappingtype), intent(inout)	isLocalToGlobalMapping,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	islocaltoglobalmapping	The ISLocalToGlobalMapping to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 2038 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_islocaltoglobalmappingdestroy().

subroutine, public cmisspetsc::petsc_islocaltoglobalmappinginitialise	(	type(petscislocaltogloabalmappingtype), intent(inout)	isLocalToGlobalMapping,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	islocaltoglobalmapping	The ISLocalToGlobalMapping to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 2064 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_kspcreate	(	intent(in)	communicator,
		type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPCreate routine.

Parameters

[in,out]	ksp	On exit, the KSP object
[out]	err	The error code
[out]	error	The error string

Definition at line 2270 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspdestroy	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPDestroy routine.

Parameters

[in,out]	ksp	The KSP to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 2301 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_kspfinalise().

subroutine, public cmisspetsc::petsc_kspfinalise	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Finalise the PETSc KSP structure and destroy the KSP.

Parameters

[in,out]	ksp	The KSP to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 2220 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_kspdestroy().

subroutine, public cmisspetsc::petsc_kspgetconvergedreason	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	reason,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPGetConvergedReason routine.

Parameters

[in,out]	ksp	The KSP information
[out]	reason	On exit, the converged reason
[out]	err	The error code
[out]	error	The error string

Definition at line 2332 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspgetiterationnumber	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	iterationNumber,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPGetIterationNumber routine.

Parameters

[in,out]	ksp	The KSP information
[out]	iterationnumber	On exit, the number of iterations
[out]	err	The error code
[out]	error	The error string

Definition at line 2362 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspgetpc	(	type(petscksptype), intent(inout)	ksp,
		type(petscpctype), intent(inout)	pc,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPGetPC routine.

Parameters

[in,out]	ksp	The KSP to get the PC for
[in,out]	pc	On exit, the PC associated with the KSP
[out]	err	The error code
[out]	error	The error string

Definition at line 2393 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspgetresidualnorm	(	type(petscksptype), intent(inout)	ksp,
		real(dp), intent(out)	residualNorm,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPGetResidualNorm routine.

Parameters

[in,out]	ksp	The KSP to get the PC for
[out]	residualnorm	On exit, the residual norm for the KSP
[out]	err	The error code
[out]	error	The error string

Definition at line 2424 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspgmressetrestart	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	restart,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPGMRESSetRestart routine.

Parameters

[in,out]	ksp	The KSP to set the GMRES restart for
[out]	restart	The restart value to set
[out]	err	The error code
[out]	error	The error string

Definition at line 2455 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspinitialise	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Initialise the PETSc KSP structure.

Parameters

[in,out]	ksp	The KSP to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 2246 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_kspsetfromoptions	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetFromOptions routine.

Parameters

[in,out]	ksp	The Ksp to set the options for
[out]	err	The error code
[out]	error	The error string

Definition at line 2486 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsetinitialguessnonzero	(	type(petscksptype), intent(inout)	ksp,
		logical, intent(in)	flag,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetInitialGuessNonzero routine.

Parameters

[in,out]	ksp	The KSP to set the initial guess non zero for
[in]	flag	If flag is .TRUE. the initial guess is non-zero, if flag is .FALSE. the initial guess is zero.
[out]	err	The error code
[out]	error	The error string

Definition at line 2516 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsetoperators	(	type(petscksptype), intent(inout)	ksp,
		type(petscmattype), intent(inout)	amat,
		type(petscmattype), intent(inout)	pmat,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetOperators routine.

Parameters

[in,out]	ksp	The Ksp to set the operators for
[in,out]	amat	The matrix associated with the linear system
[in,out]	pmat	The matrix to be used in constructing the preconditioner
[out]	err	The error code
[out]	error	The error string

Definition at line 2551 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsetreusepreconditioner	(	type(petscksptype), intent(inout)	ksp,
		logical, intent(in)	flag,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetReusePreconditioner routine.

Parameters

[in,out]	ksp	The KSP to set the options for
[in]	flag	If flag is .TRUE. then the current precondition is reused, if flag is .FALSE. it is not
[out]	err	The error code
[out]	error	The error string

Definition at line 2583 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsettolerances	(	type(petscksptype), intent(inout)	ksp,
		real(dp), intent(in)	rTol,
		real(dp), intent(in)	aTol,
		real(dp), intent(in)	dTol,
		integer(intg), intent(in)	maxIterations,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetTolerances routine.

Parameters

[in,out]	ksp	The KSP to set the tolerances for
[in]	rtol	The relative tolerance to set
[in]	atol	The absolution tolerance to set
[in]	dtol	The divergence tolerance to set
[in]	maxiterations	The maximum number of iterations
[out]	err	The error code
[out]	error	The error string

Definition at line 2618 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsettype	(	type(petscksptype), intent(inout)	ksp,
		intent(in)	method,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetType routine.

Parameters

[in,out]	ksp	The KSP to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 2652 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsetup	(	type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSetUp routine.

Parameters

[in,out]	ksp	The KSP to set up
[out]	err	The error code
[out]	error	The error string

Definition at line 2683 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_kspsolve	(	type(petscksptype), intent(inout)	ksp,
		type(petscvectype), intent(inout)	b,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc KSPSolve routine.

Parameters

[in,out]	ksp	The Ksp to set up
[in,out]	b	The RHS vector
[in,out]	x	The solution vector
[out]	err	The error code
[out]	error	The error string

Definition at line 2713 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_logview	(	intent(in)	viewer,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PetscLogView routine.

Parameters

[out]	err	The error code
[out]	error	The error string

Definition at line 1845 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matassemblybegin	(	type(petscmattype), intent(inout)	A,
		intent(in)	assemblyType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatAssemblyBegin routine.

Parameters

[out]	err	The error code
[out]	error	The error string

Definition at line 2795 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_form(), and distributed_matrix_vector::distributed_matrix_update_start().

subroutine, public cmisspetsc::petsc_matassemblyend	(	type(petscmattype), intent(inout)	A,
		intent(in)	assemblyType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatAssemblyEnd routine.

Parameters

[in,out]	a	The matrix to assemble
[out]	err	The error code
[out]	error	The error string

Definition at line 2826 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_form(), and distributed_matrix_vector::distributed_matrix_update_finish().

subroutine, public cmisspetsc::petsc_matcoloringapply	(	type(petscmatcoloringtype), intent(inout)	matColoring,
		type(petsciscoloringtype), intent(inout)	isColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatColoringApply routine.

Parameters

[in,out]	matcoloring	The coloring to apply
[in,out]	iscoloring	The index set coloring to apply to
[out]	err	The error code
[out]	error	The error string

Definition at line 3841 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matcoloringcreate	(	type(petscmattype), intent(inout)	a,
		type(petscmatcoloringtype), intent(inout)	matColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatColoringCreate routine.

Parameters

[in,out]	a	The matrix to create the coloring for
[in,out]	matcoloring	On exit, the created coloring
[out]	err	The error code
[out]	error	The error string

Definition at line 3872 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matcoloringdestroy	(	type(petscmatcoloringtype), intent(inout)	matColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatColoringDestroy routine.

Parameters

[in,out]	matcoloring	The coloring to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 3903 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_matcoloringfinalise().

subroutine, public cmisspetsc::petsc_matcoloringfinalise	(	type(petscmatcoloringtype), intent(inout)	matColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	matcoloring	The matColoring to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 3791 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_matcoloringdestroy().

subroutine, public cmisspetsc::petsc_matcoloringinitialise	(	type(petscmatcoloringtype), intent(inout)	matColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	matcoloring	The matColoring to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 3817 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_matcoloringsetfromoptions	(	type(petscmatcoloringtype), intent(inout)	matColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatColoringSetFromOptions routine.

Parameters

[in,out]	matcoloring	The coloring to set the options for
[out]	err	The error code
[out]	error	The error string

Definition at line 3935 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matcoloringsettype	(	type(petscmatcoloringtype), intent(inout)	matColoring,
		intent(in)	coloringType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatColoringSetType routine.

Parameters

[in,out]	matcoloring	The coloring to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 3965 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matcreate	(	intent(in)	communicator,
		type(petscmattype), intent(inout)	A,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatCreate routine.

Parameters

[in,out]	a	On exit, the created matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 2857 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matcreateaij	(	intent(in)	communicator,
		integer(intg), intent(in)	localM,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalM,
		integer(intg), intent(in)	globalN,
		integer(intg), intent(in)	diagNumberNonZerosPerRow,
		integer(intg), dimension(:), intent(in)	diagNumberNonZerosEachRow,
		integer(intg), intent(in)	offDiagNumberNonZerosPerRow,
		integer(intg), dimension(:), intent(in)	offDiagNumberNonZerosEachRow,
		type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatCreateAIJ routine.

Parameters

[in]	localm	The number of local rows
[in]	localn	The number of local columns
[in]	globalm	The number of global rows
[in]	globaln	The number of global columns
[in]	diagnumbernonzerosperrow	The maximum number of non-zeros per row in the diagonal part of the matrix
[in]	diagnumbernonzeroseachrow	The number of non-zeros per row in the diagonal part of the matrix
[in]	offdiagnumbernonzerosperrow	The maximum number of non-zeros per row in the off-diagonal part of the matrix
[in]	offdiagnumbernonzeroseachrow	The number of non-zeros per row in the off-diagonal part of the matrix
[in,out]	a	On exit, the created matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 2889 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_petsc_create_finish().

subroutine, public cmisspetsc::petsc_matcreatedense	(	intent(in)	communicator,
		integer(intg), intent(in)	localM,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalM,
		integer(intg), intent(in)	globalN,
		real(dp), dimension(:), intent(in)	matrixData,
		type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatCreateDense routine.

Parameters

[in]	localm	The number of local rows
[in]	localn	The number of local columns
[in]	globalm	The number of global columns
[in]	globaln	The number of global rows
[in]	matrixdata	Optional, the allocated matrix data.
[in,out]	a	On exit, the created matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 2929 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_petsc_create_finish().

subroutine, public cmisspetsc::petsc_matcreateseqaij	(	intent(in)	communicator,
		integer(intg), intent(in)	m,
		integer(intg), intent(in)	n,
		integer(intg), intent(in)	numberNonZerosPerRow,
		integer(intg), dimension(:), intent(in)	numberNonZerosEachRow,
		type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatCreateSeqAIJ routine.

Parameters

[in]	m	The number of rows
[in]	n	The number of columns
[in]	numbernonzerosperrow	The maximum number of non-zeros per row
[in]	numbernonzeroseachrow	The number of non-zeros in each row
[in,out]	a	On exit, the created matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 2965 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matcreateseqdense	(	intent(in)	communicator,
		integer(intg), intent(in)	m,
		integer(intg), intent(in)	n,
		real(dp), dimension(*), intent(in)	matrixData,
		type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatCreateSeqDense routine.

Parameters

[in]	m	The number of rows
[in]	n	The number of columns
[in]	matrixdata	Optional, the allocated matrix data
[in,out]	a	On exit, the created matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 3000 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matdensegetarrayf90	(	type(petscmattype), intent(inout), target	a,
		real(dp), dimension(:,:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatDenseGetArrayF90 routine.

Parameters

[in,out]	a	The matrix to get the array for
	array	On exit, a pointer to the matrix array
[out]	err	The error code
[out]	error	The error string

Definition at line 3034 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_data_get_dp().

subroutine, public cmisspetsc::petsc_matdenserestorearrayf90	(	type(petscmattype), intent(inout)	a,
		real(dp), dimension(:,:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatDenseRestoreArrayF90 routine.

Parameters

[in,out]	a	The matrix to restore the array for
	array	A pointer to the matrix array to restore
[out]	err	The error code
[out]	error	The error string

Definition at line 3069 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_data_restore_dp().

subroutine, public cmisspetsc::petsc_matdestroy	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatDestroy routine.

Parameters

[in,out]	a	The matrix to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 3100 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_matfinalise().

subroutine, public cmisspetsc::petsc_matfdcoloringcreate	(	type(petscmattype), intent(inout)	a,
		type(petsciscoloringtype), intent(in)	isColoring,
		type(petscmatfdcoloringtype), intent(out)	matFDColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatFDColoringCreate routine.

Parameters

[in,out]	a	The PETSc matrix to create the FD coloring for
[in]	iscoloring	The index set coloring to create the finite difference coloring for
[out]	matfdcoloring	On exit, the matrix finite difference coloring
[out]	err	The error code
[out]	error	The error string

Definition at line 4046 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matfdcoloringdestroy	(	type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatFDColoringDestroy routine.

Parameters

[in,out]	matfdcoloring	The matrix finite difference coloring to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 4078 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_matfdcoloringfinalise().

subroutine, public cmisspetsc::petsc_matfdcoloringfinalise	(	type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	matfdcoloring	The MatFDColoring to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 3996 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_matfdcoloringdestroy().

subroutine, public cmisspetsc::petsc_matfdcoloringinitialise	(	type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	matfdcoloring	The MatFDColoring to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 4022 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_matfdcoloringsetfromoptions	(	type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatFDColoringSetFromOptions routine.

Parameters

[in,out]	matfdcoloring	The matrix finite difference coloring to set
[out]	err	The error code
[out]	error	The error string

Definition at line 4109 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matfdcoloringsetfunction	(	type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		external	fFunction,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatFDColoringSetFunction routine.

Parameters

[in,out]	matfdcoloring	The matrix finite difference coloring to set
	ffunction	The external function to call
	ctx	The solver data to pass to the function
[out]	err	The error code
[out]	error	The error string

Definition at line 4171 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matfdcoloringsetparameters	(	type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		real(dp)	rError,
		real(dp)	uMin,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatFDColoringSetParameters routine.

Parameters

[in,out]	matfdcoloring	The matrix finite difference coloring to set
	rerror	The square root of the relative error
	umin	MatFDColoring umin option
[out]	err	The error code
[out]	error	The error string

Definition at line 4139 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matfdcoloringsetup	(	type(petscmattype), intent(inout)	a,
		type(petsciscoloringtype), intent(inout)	isColoring,
		type(petscmatfdcoloringtype), intent(inout)	matFDColoring,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatFDColoringSetup routine.

Parameters

[in,out]	a	The PETSc matrix to setup the FD coloring for
[in,out]	iscoloring	The index set coloring to setup the finite difference coloring for
[in,out]	matfdcoloring	The matrix finite difference coloring to setup
[out]	err	The error code
[out]	error	The error string

Definition at line 4203 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matfinalise	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	a	The matrix to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 2745 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_matdestroy().

Referenced by distributed_matrix_vector::distributed_matrix_petsc_finalise().

subroutine, public cmisspetsc::petsc_matgetinfo	(	type(petscmattype), intent(inout)	a,
		intent(in)	flag,
		dimension(mat_info_size), intent(out)	info,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatGetInfo routine.

Parameters

[in,out]	a	The matrix to get the information of
[out]	err	The error code
[out]	error	The error string

Definition at line 3131 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matgetownershiprange	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	firstRow,
		integer(intg), intent(out)	lastRow,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatGetOwnershipRange routine.

Parameters

[in,out]	a	The matrix to get the ownership range of
[out]	firstrow	On exit, the first row for the matrix
[out]	lastrow	On exit, the last row for the matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 3163 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matgetrow	(	type(petscmattype), intent(inout)	A,
		integer(intg), intent(in)	rowNumber,
		integer(intg), intent(out)	numberOfColumns,
		integer(intg), dimension(:), intent(out)	columns,
		real(dp), dimension(:), intent(out)	values,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatGetRow routine.

Parameters

[in,out]	a	The matrix to get the array for
[in]	rownumber	The row number to get the row values for
[out]	numberofcolumns	On return, the number of nonzero columns in the row
[out]	columns	On return, the column numbers for the nonzero columns in the row
[out]	values	On exit, the nonzero values in the row.
[out]	err	The error code
[out]	error	The error string

Definition at line 3195 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matgetvalues	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(in)	m,
		integer(intg), dimension(*), intent(in)	mIndices,
		integer(intg), intent(in)	n,
		integer(intg), dimension(*), intent(in)	nIndices,
		real(dp), dimension(*), intent(out)	values,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatGetValues routine.

Parameters

[in,out]	a	The matrix to get the values of
[in]	m	The number of row indices
[in]	mindices	The row indices
[in]	n	The number of column indices
[in]	nindices	The column indices
[out]	values	The values to get
[out]	err	The error code
[out]	error	The error string

Definition at line 3229 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_values_get_dp(), distributed_matrix_vector::distributed_matrix_values_get_dp1(), and distributed_matrix_vector::distributed_matrix_values_get_dp2().

subroutine, public cmisspetsc::petsc_matinitialise	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	a	The matrix to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 2771 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

Referenced by distributed_matrix_vector::distributed_matrix_override_set_off(), and distributed_matrix_vector::distributed_matrix_petsc_initialise().

subroutine, public cmisspetsc::petsc_matmumpssetcntl	(	type(petscmattype), intent(inout)	factoredMatrix,
		integer(intg), intent(in)	icntl,
		real(dp), intent(in)	val,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatMumpsSetCntl routine.

Parameters

[in,out]	factoredmatrix	The factored matrix from PETSc-MUMPS interface
[in]	icntl	The MUMPS CNTL integer control parameter
[in]	val	The MUMPS CNTL real value to set: CNTL(icntl)=val
[out]	err	The error code
[out]	error	The error string

Definition at line 3296 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matmumpsseticntl	(	type(petscmattype), intent(inout)	factoredMatrix,
		integer(intg), intent(in)	icntl,
		integer(intg), intent(in)	ival,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatMumpsSetIcntl routine.

Parameters

[in,out]	factoredmatrix	The factored matrix from PETSc-MUMPS interface
[in]	icntl	The MUMPS ICNTL integer control parameter
[in]	ival	The MUMPS ICNTL integer value to set: ICNTL(icntl)=ival
[out]	err	The error code
[out]	error	The error string

Definition at line 3264 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matrestorerow	(	type(petscmattype), intent(inout)	A,
		integer(intg), intent(in)	rowNumber,
		integer(intg), intent(out)	numberOfColumns,
		integer(intg), dimension(:), intent(out)	columns,
		real(dp), dimension(:), intent(out)	values,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatRestoreRow routine.

Parameters

[in,out]	a	The matrix to restore the row for
[in]	rownumber	The row number to restore the row values for
[out]	numberofcolumns	The number of nonzero columns in the row
[out]	columns	The column numbers for the nonzero columns in the row
[out]	values	The nonzero values in the row to restore.
[out]	err	The error code
[out]	error	The error string

Definition at line 3328 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matseqaijgetarrayf90	(	type(petscmattype), intent(inout), target	a,
		real(dp), dimension(:,:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSeqAIJGetArrayF90 routine.

Parameters

[in,out]	a	The matrix to get the array for
	array	On exit, a pointer to the matrix array
[out]	err	The error code
[out]	error	The error string

Definition at line 3362 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_data_get_dp().

subroutine, public cmisspetsc::petsc_matseqaijgetmaxrownonzeros	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	maxNumberNonZeros,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSeqAIJGetMaxRowNonzeros routine.

Parameters

[in,out]	a	The matrix to get the maximum number of non zeros for
[out]	maxnumbernonzeros	On exit, the maximum number of non zeros in any row of the matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 3397 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matseqaijrestorearrayf90	(	type(petscmattype), intent(inout)	a,
		real(dp), dimension(:,:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSeqAIJRestoreArrayF90 routine.

Parameters

[in,out]	a	The matrix to restore the array for
	array	A pointer to the matrix array to restore
[out]	err	The error code
[out]	error	The error string

Definition at line 3430 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_data_restore_dp().

subroutine, public cmisspetsc::petsc_matsetlocaltoglobalmapping	(	type(petscmattype), intent(inout)	a,
		type(petscislocaltogloabalmappingtype), intent(in)	isLocalToGlobalMapping,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetLocalToGlobalMapping routine.

Parameters

[in,out]	a	The matrix to set the local to global mapping for
[in]	islocaltoglobalmapping	The local to global mapping context
[out]	err	The error code
[out]	error	The error string

Definition at line 3461 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matsetoption	(	type(petscmattype), intent(inout)	a,
		intent(in)	option,
		logical, intent(in)	flag,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetOption routine.

Parameters

[in,out]	a	The matrix to set the option for
[in]	flag	The option flag to set
[out]	err	The error code
[out]	error	The error string

Definition at line 3492 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_petsc_create_finish().

subroutine, public cmisspetsc::petsc_matsetsizes	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(in)	localM,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalM,
		integer(intg), intent(in)	globalN,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetSizes routine.

Parameters

[in,out]	a	The matrix to set the size of
[in]	localm	Number of local rows
[in]	localn	Number of local columns
[in]	globalm	Number of global rows
[in]	globaln	Number of global columns
[out]	err	The error code
[out]	error	The error string

Definition at line 3528 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_matsettype ( type(petscmattype), intent(inout)  a, intent(in)  matrixType, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc MatSetType routine.

Parameters

[in,out]	a	The matrix to set the type of
[out]	err	The error code
[out]	error	The error string

Definition at line 3562 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matsetvalue	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(in)	row,
		integer(intg), intent(in)	col,
		real(dp), intent(in)	value,
		intent(in)	insertMode,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetValue routine.

Parameters

[in,out]	a	The matrix to set the values of
[in]	row	The row index
[in]	col	The column index
[in]	value	The value to set
[out]	err	The error code
[out]	error	The error string

Definition at line 3593 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_form(), and distributed_matrix_vector::distributed_matrix_values_add_dp1().

subroutine, public cmisspetsc::petsc_matsetvaluelocal	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(in)	row,
		integer(intg), intent(in)	col,
		real(dp), intent(in)	VALUE,
		intent(in)	insertMode,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetValueLocal routine.

Parameters

[in,out]	a	The matrix to set the values of
[in]	row	The row index
[in]	col	The column index
[in]	value	The value to set
[out]	err	The error code
[out]	error	The error string

Definition at line 3662 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matsetvalues	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(in)	m,
		integer(intg), dimension(*), intent(in)	mIndices,
		integer(intg), intent(in)	n,
		integer(intg), dimension(*), intent(in)	nIndices,
		real(dp), dimension(*), intent(in)	values,
		intent(in)	insertMode,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetValues routine.

Parameters

[in,out]	a	The matrix to set the values of
[in]	m	The number of row indices
[in]	mindices	The row indices
[in]	n	The number of column indices
[in]	nindices	The column indices
[in]	values	The values to set
[out]	err	The error code
[out]	error	The error string

Definition at line 3627 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_values_add_dp(), distributed_matrix_vector::distributed_matrix_values_add_dp2(), distributed_matrix_vector::distributed_matrix_values_set_dp(), distributed_matrix_vector::distributed_matrix_values_set_dp1(), and distributed_matrix_vector::distributed_matrix_values_set_dp2().

subroutine, public cmisspetsc::petsc_matsetvalueslocal	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(in)	m,
		integer(intg), dimension(:), intent(in)	mIndices,
		integer(intg), intent(in)	n,
		integer(intg), dimension(:), intent(in)	nIndices,
		real(dp), dimension(:), intent(in)	values,
		intent(in)	insertMode,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatSetValuesLocal routine.

Parameters

[in,out]	a	The matrix to set the values of
[in]	m	The number of row indices
[in]	mindices	The row indices
[in]	n	The number of column indices
[in]	nindices	The column indices
[in]	values	The values to set
[out]	err	The error code
[out]	error	The error string

Definition at line 3694 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_matview	(	type(petscmattype), intent(inout)	a,
		intent(in)	viewer,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatView routine.

Parameters

[in,out]	a	The matrix to view
[out]	err	The error code
[out]	error	The error string

Definition at line 3730 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_output().

subroutine, public cmisspetsc::petsc_matzeroentries	(	type(petscmattype), intent(inout)	a,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc MatZeroEntries routine.

Parameters

[in,out]	a	The matrix to zero the entries of
[out]	err	The error code
[out]	error	The error string

Definition at line 3761 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_matrix_all_values_set_dp(), and distributed_matrix_vector::distributed_matrix_form().

subroutine, public cmisspetsc::petsc_pcfactorgetmatrix	(	type(petscpctype), intent(inout)	pc,
		type(petscmattype), intent(out)	factoredMatrix,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PCFactorGetMatrix routine.

Parameters

[in,out]	pc	The preconditioner to set the solver package for
[out]	factoredmatrix	The factored matrix to get from preconditioner context
[out]	err	The error code
[out]	error	The error string

Definition at line 4285 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_pcfactorsetmatsolverpackage	(	type(petscpctype), intent(inout)	pc,
		intent(in)	solverPackage,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PCFactoSetMatSolverPackage routine.

Parameters

[in,out]	pc	The preconditioner to set the solver package for
[out]	err	The error code
[out]	error	The error string

Definition at line 4316 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_pcfactorsetupmatsolverpackage	(	type(petscpctype), intent(inout)	pc,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PCFactorSetUpMatSolverPackage routine.

Parameters

[in,out]	pc	The preconditioner to set the solver package for
[out]	err	The error code
[out]	error	The error string

Definition at line 4347 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_pcfinalise	(	type(petscpctype), intent(inout)	pc,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	pc	The PC to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 4235 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_pcinitialise	(	type(petscpctype), intent(inout)	pc,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	pc	The PC to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 4261 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_pcsetfromoptions	(	type(petscpctype), intent(inout)	pc,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PCSetFromOptions routine.

Parameters

[in,out]	pc	The preconditioner to set the options for
[out]	err	The error code
[out]	error	The error string

Definition at line 4412 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_pcsetreusepreconditioner	(	type(petscpctype), intent(inout)	pc,
		logical, intent(in)	flag,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PCSetReusePreconditioner routine.

Parameters

[in,out]	pc	The preconditioner to set the reuse for
[in]	flag	True/false
[out]	err	The error code
[out]	error	The error string

Definition at line 4377 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_pcsettype	(	type(petscpctype), intent(inout)	pc,
		intent(in)	method,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc PCSetType routine.

Parameters

[in,out]	pc	The preconditioner to set the type of
[out]	err	The error code
[out]	error	The error string

Definition at line 4442 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_setvalueslocal ( type(petscvectype), intent(inout)  x, integer(intg), intent(in)  n, integer(intg), dimension(*), intent(in)  indices, real(dp), dimension(*), intent(in)  values,   insertMode, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc VecSetValuesLocal routine.

Parameters

[in,out]	x	The vector to set the values of
[in]	n	The number of indices
[in]	indices	The local indices
[in]	values	The values to set
[in]	values	The insert mode
[out]	err	The error code
[out]	error	The error string

Definition at line 7475 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snescomputejacobiandefault	(	type(petscsnestype), intent(inout)	snes,
		type(petscvectype), intent(inout)	x,
		type(petscmattype), intent(inout)	j,
		type(petscmattype), intent(inout)	b,
		type(solver_type), pointer	ctx,
		integer(intg), intent(inout)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESComputeJacobianDefault routine.

Parameters

[in,out]	snes	The PETSc SNES
[in,out]	x	The PETSc x Vec
[in,out]	j	The PETSc J Mat
[in,out]	b	The PETSc B Mat
	ctx	The passed through context
[in,out]	err	The error code
[out]	error	The error string

Definition at line 4523 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snescomputejacobiandefaultcolor	(	type(petscsnestype), intent(inout)	snes,
		type(petscvectype), intent(inout)	x,
		type(petscmattype), intent(inout)	j,
		type(petscmattype), intent(inout)	b,
		type(petscmatfdcoloringtype), pointer	ctx,
		integer(intg), intent(inout)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESComputeJacobianDefaultColor routine.

Parameters

[in,out]	snes	The PETSc SNES
[in,out]	x	The PETSc X Vec
[in,out]	j	The PETSc J Mat
[in,out]	b	The PETSc B Mat
	ctx	The passed through context
[in,out]	err	The error code
[out]	error	The error string

Definition at line 4556 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snescreate	(	intent(in)	communicator,
		type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESCreate routine.

Parameters

[in,out]	snes	On exit, the SNES information
[out]	err	The error code
[out]	error	The error string

Definition at line 4589 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesdestroy	(	type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESDestroy routine.

Parameters

[in,out]	snes	The SNES to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 4620 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_snesfinalise().

subroutine, public cmisspetsc::petsc_snesfinalise	(	type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	snes	The SNES to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 4473 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_snesdestroy().

subroutine, public cmisspetsc::petsc_snesgetapplicationcontext	(	type(petscsnestype), intent(inout)	snes,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetApplicationContext routine.

Parameters

[in,out]	snes	The SNES to get the context for
	ctx	On exit, the solver data context to get
[out]	err	The error code
[out]	error	The error string

Definition at line 4651 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesgetconvergedreason	(	type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	reason,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetConvergedReason routine.

Parameters

[in,out]	snes	The SNES to get the converged reason for
[out]	reason	On exit, the converged reason
[out]	err	The error code
[out]	error	The error string

Definition at line 4686 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesgetfunction	(	type(petscsnestype), intent(inout)	snes,
		type(petscvectype), intent(out)	f,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetFunction routine.

Parameters

[in,out]	snes	The SNES to get the function from
[out]	f	The residual vector
[out]	err	The error code
[out]	error	The error string

Definition at line 4717 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesgetiterationnumber	(	type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	iterationNumber,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetIterationNumber routine.

Parameters

[in,out]	snes	The SNES to get the iteration number for
[out]	iterationnumber	On exit, the number of iterations
[out]	err	The error code
[out]	error	The error string

Definition at line 4747 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_snesgetjacobiansolver ( type(petscsnestype), intent(inout)  snes, type(petscmattype), intent(inout)  a, type(petscmattype), intent(inout)  b, external  jFunction, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc SNESSetJacobian routine for solver contexts.

Parameters

[in,out]	snes	The SNES to set the function for
[in,out]	a	The Jacobian matrix
[in,out]	b	The Jacobian preconditioning matrix
	jfunction	The external function to call
[out]	err	The error code
[out]	error	The error string

Definition at line 4778 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_snesgetjacobianspecial ( type(petscsnestype), intent(inout)  snes, type(petscmattype), intent(inout)  a, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc SNESSetJacobian routine for solver contexts.

Parameters

[in,out]	snes	The SNES to set the function for
[in,out]	a	The Jacobian matrix
[out]	err	The error code
[out]	error	The error string

Definition at line 4812 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesgetksp	(	type(petscsnestype), intent(inout)	snes,
		type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetKSP routine.

Parameters

[in,out]	snes	The SNES to get the iteration number for
[in,out]	ksp	On exit, the KSP to associated with the SNES
[out]	err	The error code
[out]	error	The error string

Definition at line 4844 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesgetlinesearch	(	type(petscsnestype), intent(inout)	snes,
		type(petscsneslinesearchtype), intent(out)	lineSearch,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetLineSearch routine.

Parameters

[in,out]	snes	The SNES to get the SNES line search for
[out]	linesearch	On return, the SNES line search object
[out]	err	The error code
[out]	error	The error string

Definition at line 4875 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesgetsolutionupdate	(	type(petscsnestype), intent(inout)	snes,
		type(petscvectype), intent(inout)	solutionUpdate,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSC SNESGetSolutionUpdate routine.

Parameters

[in,out]	snes	The SNES to get the solution update for
[in,out]	solutionupdate	On exit, the solution update
[out]	err	The error code
[out]	error	The error string

Definition at line 4905 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesinitialise	(	type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	snes	The snes to
[out]	err	The error code
[out]	error	The error string

Definition at line 4499 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_sneslinesearchbtsetalpha	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		real(dp), intent(in)	alpha,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchBTSetAlpha routine.

Parameters

[in,out]	linesearch	The SNES back-tracking LineSearch to set alpha for
[in]	alpha	The alpha descent parameter to set
[out]	err	The error code
[out]	error	The error string

Definition at line 5492 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchcomputenorms	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchComputeNorms routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to compute norms for
[out]	err	The error code
[out]	error	The error string

Definition at line 5522 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchfinalise	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	linesearch	The SNES LineSearch to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 5445 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_sneslinesearchgetnorms	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		real(dp), intent(inout)	xNorm,
		real(dp), intent(inout)	fNorm,
		real(dp), intent(inout)	yNorm,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the petsc SnesLineSearchGetNorms routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to get the norms for X, Y, and F from.
[in,out]	xnorm	On exit, the norm of the current solution
[in,out]	fnorm	On exit, the norm of the current function
[in,out]	ynorm	On exit, the norm of the current update
[out]	err	The error code
[out]	error	The error string

Definition at line 5552 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchgetvecs	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		type(petscvectype), intent(inout)	x,
		type(petscvectype), intent(inout)	f,
		type(petscvectype), intent(inout)	y,
		type(petscvectype), intent(inout)	w,
		type(petscvectype), intent(inout)	g,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchGetVecs routine.

Parameters

[in,out]	linesearch	The PetcsSnesLineSearch to get the vectors from the SNESLineSearch
[in,out]	x	The The old solution
[in,out]	f	The old function
[in,out]	y	The search direction
[in,out]	w	The new solution
[in,out]	g	The new function
[out]	err	The error code
[out]	error	The error string

Definition at line 5585 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchinitialise	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	linesearch	The SNES LineSearch to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 5470 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_sneslinesearchsetcomputenorms	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		logical, intent(in)	computeNorms,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchSetComputeNorms routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to set whether to compute norms
[in]	computenorms	Whether to compute norms
[out]	err	The error code
[out]	error	The error string

Definition at line 5620 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchsetmonitor	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		logical, intent(in)	monitorLinesearch,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchSetMonitor routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to set whether to output linesearch debug information
[in]	monitorlinesearch	Whether to output linesearch debug information
[out]	err	The error code
[out]	error	The error string

Definition at line 5655 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchsetnorms	(	type(petscsnestype), intent(inout)	snes,
		real(dp), intent(inout)	xNorm,
		real(dp), intent(inout)	fNorm,
		real(dp), intent(inout)	yNorm,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the petsc SnesLineSearchSetNorms routine.

Parameters

[in,out]	snes	The SNES to get the computed norms for x, y, and f
[in,out]	xnorm	On exit, the norm of the current solution
[in,out]	fnorm	On exit, the norm of the current function
[in,out]	ynorm	On exit, the norm of the current update
[out]	err	The error code
[out]	error	The error string

Definition at line 5690 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchsetorder	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		intent(in)	lineSearchOrder,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchSetOrder routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to set the line search order for
[out]	err	The error code
[out]	error	The error string

Definition at line 5722 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchsettolerances	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		real(dp), intent(in)	steptol,
		real(dp), intent(in)	maxstep,
		real(dp), intent(in)	rtol,
		real(dp), intent(in)	atol,
		real(dp), intent(in)	ltol,
		integer(intg), intent(in)	maxIt,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchSetTolerances routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to set tolerances for
[in]	steptol	The minimum steplength
[in]	maxstep	The maximum steplength
[in]	rtol	The relative tolerance for iterative line searches
[in]	atol	The absolute tolerance for iterative line searches
[in]	ltol	The change in lambda tolerance for iterative line searches
[in]	maxit	The maximum number of iterations of the line search
[out]	err	The error code
[out]	error	The error string

Definition at line 5763 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_sneslinesearchsettype	(	type(petscsneslinesearchtype), intent(inout)	lineSearch,
		intent(in)	lineSearchType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESLineSearchSetType routine.

Parameters

[in,out]	linesearch	The SNES LineSearch to set the line search type for
[out]	err	The error code
[out]	error	The error string

Definition at line 5798 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesmonitorset	(	type(petscsnestype), intent(inout)	snes,
		external	mFunction,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESMonitorSet routine.

Parameters

[in,out]	snes	The SNES to set from the command line options
	mfunction	The external monitor function to set
	ctx	The solver data to pass to the monitor function
[out]	err	The error code
[out]	error	The error string

Definition at line 4936 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesqnsetrestarttype	(	type(petscsnestype), intent(inout)	snes,
		intent(in)	rType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESQNSetRestartType routine.

Parameters

[in,out]	snes	The SNES to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 4968 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesqnsetscaletype	(	type(petscsnestype), intent(inout)	snes,
		intent(in)	sType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESQNSetScaleType routine.

Parameters

[in,out]	snes	The SNES to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 4999 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snesqnsettype	(	type(petscsnestype), intent(inout)	snes,
		intent(in)	qType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESQNSetType routine.

Parameters

[in,out]	snes	The SNES to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 5030 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessetapplicationcontext	(	type(petscsnestype), intent(inout)	snes,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetApplicationContext routine.

Parameters

[in,out]	snes	The SNES to set the context for
	ctx	The solver data context to set as a context
[out]	err	The error code
[out]	error	The error string

Definition at line 5061 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessetconvergencetest	(	type(petscsnestype), intent(inout)	snes,
		external	cFunction,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetFunction routine.

Parameters

[in,out]	snes	The SNES to set the function for
	cfunction	The external function to call (OpenCMISS subroutine to calculate convergence)
	ctx	The solver data to pass to the convergence test function
[out]	err	The error code
[out]	error	The error string

Definition at line 5092 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessetfromoptions	(	type(petscsnestype), intent(inout)	snes,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetFromOptions routine.

Parameters

[in,out]	snes	The SNES to set from the command line options
[out]	err	The error code
[out]	error	The error string

Definition at line 5123 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessetfunction	(	type(petscsnestype), intent(inout)	snes,
		type(petscvectype), intent(inout)	f,
		external	fFunction,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetFunction routine.

Parameters

[in,out]	snes	The SNES to set the function for
[in,out]	f	The residual vector
	ffunction	The external function to call
	ctx	The solver data to pass to the function
[out]	err	The error code
[out]	error	The error string

Definition at line 5153 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_snessetjacobianmatfdcoloring ( type(petscsnestype), intent(inout)  snes, type(petscmattype), intent(inout)  a, type(petscmattype), intent(inout)  b, external  jFunction, type(petscmatfdcoloringtype)  ctx, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc SNESSetJacobian routine for MatFDColoring contexts.

Parameters

[in,out]	snes	The snes to set the function for
[in,out]	a	The Jacobian matrix
[in,out]	b	The Jacobian preconditioning matrix
	jfunction	The external function to call
	ctx	The MatFDColoring data to pass to the function
[out]	err	The error code
[out]	error	The error string

Definition at line 5186 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), petschandleerror, and snessetjacobianbuffer().

subroutine cmisspetsc::petsc_snessetjacobiansolver ( type(petscsnestype), intent(inout)  snes, type(petscmattype), intent(inout)  a, type(petscmattype), intent(inout)  b, external  jFunction, type(solver_type), pointer  ctx, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc SNESSetJacobian routine for solver contexts.

Parameters

[in,out]	snes	The SNES to set the function for
[in,out]	a	The Jacobian matrix
[in,out]	b	The Jacobian preconditioning matrix
	jfunction	The external function to call
	ctx	The solver data to pass to the function
[out]	err	The error code
[out]	error	The error string

Definition at line 5220 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessetksp	(	type(petscsnestype), intent(inout)	snes,
		type(petscksptype), intent(inout)	ksp,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESGetKSP routine.

Parameters

[in,out]	snes	The SNES to set the KSP for
[in,out]	ksp	The KSP to be associated with the SNES
[out]	err	The error code
[out]	error	The error string

Definition at line 5254 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessetnormschedule	(	type(petscsnestype), intent(inout)	snes,
		intent(in)	normSchedule,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetNormSchedule routine.

Parameters

[in,out]	snes	The SNES to set the norm type for
[out]	err	The error code
[out]	error	The error string

Definition at line 5285 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessettolerances	(	type(petscsnestype), intent(inout)	snes,
		real(dp), intent(in)	absTol,
		real(dp), intent(in)	rTol,
		real(dp), intent(in)	sTol,
		integer(intg), intent(in)	maxIterations,
		integer(intg), intent(in)	maxFunctionEvals,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetTolerances routine.

Parameters

[in,out]	snes	The SNES to set the tolerances for
[in]	abstol	The absolute convergence tolerance
[in]	rtol	The relative convergence tolerance
[in]	stol	The convergence tolerance for the change in the solution between steps
[in]	maxiterations	The maximum number of iterations
[in]	maxfunctionevals	The maximum number of function evaluations
[out]	err	The error code
[out]	error	The error string

Definition at line 5316 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessettrustregiontolerance	(	type(petscsnestype), intent(inout)	snes,
		real(dp), intent(in)	trTol,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetTrustRegionTolerance routine.

Parameters

[in,out]	snes	The SNES to set the tolerances for
[in]	trtol	The trust region tolerance
[out]	err	The error code
[out]	error	The error string

Definition at line 5351 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessettype	(	type(petscsnestype), intent(inout)	snes,
		intent(in)	method,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSetType routine.

Parameters

[in,out]	snes	The SNES to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 5382 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_snessolve	(	type(petscsnestype), intent(inout)	snes,
		type(petscvectype), intent(inout)	b,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc SNESSolve routine.

Parameters

[in,out]	snes	The SNES to solve
[in,out]	b	The constant part of the equation
[in,out]	x	The solution vector
[out]	err	The error code
[out]	error	The error string

Definition at line 5413 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_tscreate	(	intent(inout)	communicator,
		type(petsctstype), intent(inout)	ts,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSCreate routine.

Parameters

[in,out]	ts	On exit, the TS information
[out]	err	The error code
[out]	error	The error string

Definition at line 5878 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tsdestroy	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSDestroy routine.

Parameters

[in,out]	ts	The TS to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 5909 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_tsfinalise().

subroutine, public cmisspetsc::petsc_tsfinalise	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	ts	The TS to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 5828 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_tsdestroy().

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tsgetsolution	(	type(petsctstype), intent(inout)	ts,
		type(petscvectype), intent(inout)	currentSolution,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSGetSolution routine.

Parameters

[in,out]	ts	The TS to set the time step for
[in,out]	currentsolution	The current solution to be set for the TS
[out]	err	The error code
[out]	error	The error string

Definition at line 5939 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_tsinitialise	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	ts	The TS to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 5854 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

subroutine, public cmisspetsc::petsc_tsmonitorset	(	type(petsctstype), intent(inout)	ts,
		external	mFunction,
		type(solver_type), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSMonitorSet routine.

Parameters

[in,out]	ts	The TS to set the monitor for
	mfunction	The external monitor function to set
	ctx	The solver data to pass to the monitor function
[out]	err	The error code
[out]	error	The error string

Definition at line 5969 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_tssetduration	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(in)	maxSteps,
		real(dp), intent(in)	maxTime,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetDuration routine.

Parameters

[in,out]	ts	The TS to set from the options
[in]	maxsteps	The maximum number of steps to use
[in]	maxtime	The maximum time to iteration to
[out]	err	The error code
[out]	error	The error string

Definition at line 6001 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssetexactfinaltime	(	type(petsctstype), intent(inout)	ts,
		logical, intent(in)	exactFinalTime,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetExactFinalTime routine.

Parameters

[in,out]	ts	The TS to set the initial time step for
[in]	exactfinaltime	The option for exact final time to set
[out]	err	The error code
[out]	error	The error string

Definition at line 6032 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssetfromoptions	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetFromOptions routine.

Parameters

[in,out]	ts	The TS to set from the options
[out]	err	The error code
[out]	error	The error string

Definition at line 6067 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_tssetinitialtimestep	(	type(petsctstype), intent(inout)	ts,
		real(dp), intent(in)	initialTime,
		real(dp), intent(in)	timeStep,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetInitialTimeStep routine.

Parameters

[in,out]	ts	The TS to set the initial time step for
[in]	initialtime	The initial time to set
[in]	timestep	The time step to set
[out]	err	The error code
[out]	error	The error string

Definition at line 6096 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssetproblemtype	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(in)	probType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetProblemType routine.

Parameters

[in,out]	ts	The TS to set the problem type for
[in]	probtype	The problem type to set
[out]	err	The error code
[out]	error	The error string

Definition at line 6127 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssetrhsfunction	(	type(petsctstype), intent(inout)	ts,
		type(petscvectype), intent(inout)	rates,
		external	rhsFunction,
		type(cellmlpetsccontexttype), pointer	ctx,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetRHSFunction routine.

Parameters

[in,out]	ts	The TS to set the problem type for
	rhsfunction	The external RHS function to call
	ctx	The solver data to pass to the function
[out]	err	The error code
[out]	error	The error string

Definition at line 6157 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssetsolution	(	type(petsctstype), intent(inout)	ts,
		type(petscvectype), intent(in)	initialSolution,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetSolution routine.

Parameters

[in,out]	ts	The TS to set the time step for
[in]	initialsolution	The initial solution to be set for the TS
[out]	err	The error code
[out]	error	The error string

Definition at line 6189 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssettimestep	(	type(petsctstype), intent(inout)	ts,
		real(dp), intent(in)	timeStep,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetTimeStep routine.

Parameters

[in,out]	ts	The TS to set the time step for
[in]	timestep	The time step to set
[out]	err	The error code
[out]	error	The error string

Definition at line 6219 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_tssettype	(	type(petsctstype), intent(inout)	ts,
		intent(in)	method,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSetType routine.

Parameters

[in,out]	ts	The TS to set the type for
[out]	err	The error code
[out]	error	The error string

Definition at line 6249 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssolve	(	type(petsctstype), intent(inout)	ts,
		type(petscvectype), intent(inout)	x,
		real(dp), intent(out)	finalTime,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSolve routine.

Parameters

[in,out]	ts	The TS to solve
[in,out]	x	The solution vector
[out]	finaltime	The final time
[out]	err	The error code
[out]	error	The error string

Definition at line 6279 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tsstep	(	type(petsctstype), intent(inout)	ts,
		integer(intg), intent(in)	steps,
		real(dp), intent(in)	pTime,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSStep routine.

Parameters

[in,out]	ts	The TS to step
[in]	steps	The number of iterations until termination
[in]	ptime	The time until termination
[out]	err	The error code
[out]	error	The error string

Definition at line 6310 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_tssundialssettolerance	(	type(petsctstype), intent(inout)	ts,
		real(dp), intent(in)	absTol,
		real(dp), intent(in)	relTol,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSundialsSetTolerance routine.

Parameters

[in,out]	ts	The TS to step
[in]	abstol	The absolute tolerance
[in]	reltol	The relative tolerance
[out]	err	The error code
[out]	error	The error string

Definition at line 6370 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_tssundialssettype	(	type(petsctstype), intent(inout)	ts,
		intent(in)	sundialsType,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc TSSundialsSetType routine.

Parameters

[in,out]	ts	The TS to step
[out]	err	The error code
[out]	error	The error string

Definition at line 6341 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_vecassemblybegin	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecAssemblyBegin routine.

Parameters

[in,out]	x	The vector to begin the assembly of
[out]	err	The error code
[out]	error	The error string

Definition at line 6450 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_update_start(), and solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_vecassemblyend	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecAssemblyEnd routine.

Parameters

[in,out]	x	The vector to end the assembly of
[out]	err	The error code
[out]	error	The error string

Definition at line 6480 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_update_finish(), and solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_veccopy	(	type(petscvectype), intent(inout)	x,
		type(petscvectype), intent(inout)	y,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCopy routine.

Parameters

[in,out]	x	The vector to copy from
[in,out]	y	The vector to copy to
[out]	err	The error code
[out]	error	The error string

Definition at line 6510 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_copy_dp().

subroutine, public cmisspetsc::petsc_veccreate	(	intent(in)	communicator,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreate routine.

Parameters

[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6541 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_veccreateghost	(	intent(in)	communicator,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalN,
		integer(intg), intent(in)	numGhosts,
		integer(intg), dimension(:), intent(in)	ghosts,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreateGhost routine.

Parameters

[in]	localn	The number of local elements
[in]	globaln	The number of global elements
[in]	numghosts	The number of ghost elements
[in]	ghosts	The global location of the each ghost element
[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6572 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_veccreateghostwitharray	(	intent(in)	communicator,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalN,
		integer(intg), intent(in)	numGhosts,
		integer(intg), dimension(:), intent(in)	ghosts,
		real(dp), dimension(:), intent(out)	array,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreateGhostWithArray routine.

Parameters

[in]	localn	The number of local elements
[in]	globaln	The number of global elements
[in]	numghosts	The number of ghost elements
[in]	ghosts	The global location of the each ghost element
[out]	array	The preallocated array of matrix data
[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6607 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_veccreatempi	(	intent(in)	communicator,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalN,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreateMPI routine.

Parameters

[in]	localn	The number of local elements
[in]	globaln	The number of global elements
[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6643 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_petsc_create_finish().

subroutine, public cmisspetsc::petsc_veccreatempiwitharray	(	intent(in)	communicator,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalN,
		real(dp), dimension(:), intent(out)	array,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreateMPIWithArray routine.

Parameters

[in]	localn	The number of local elements
[in]	globaln	The number of global elements
[out]	array	The preallocated array for the vector data
[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6676 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_veccreateseq	(	intent(in)	communicator,
		integer(intg), intent(in)	n,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreateSeq routine.

Parameters

[in]	n	The size of the vector
[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6710 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_veccreateseqwitharray	(	intent(in)	communicator,
		integer(intg), intent(in)	n,
		real(dp), dimension(:), intent(out)	array,
		type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecCreateSeqWithArray routine.

Parameters

[in]	n	The size of the vector
[out]	array	The preallocated array for the vector data
[in,out]	x	On exit, the created vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6742 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecdestroy	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecDestroy routine.

Parameters

[in,out]	x	The vector to destroy
[out]	err	The error code
[out]	error	The error string

Definition at line 6775 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by petsc_vecfinalise(), and solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_vecdot	(	type(petscvectype), intent(in)	x,
		type(petscvectype), intent(in)	y,
		real(dp), intent(out)	dotProduct,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecDot routine.

Parameters

[in]	x	The vector x
[in]	y	The vector y
[out]	dotproduct	The dot product
[out]	err	The error code
[out]	error	The error string

Definition at line 6837 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributedvector_vecdotdp().

subroutine, public cmisspetsc::petsc_vecduplicate	(	type(petscvectype), intent(inout)	x,
		type(petscvectype), intent(out)	y,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecDuplicate routine.

Parameters

[in,out]	x	The vector to duplicate
[out]	y	On exit, the new duplicated vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6806 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecfinalise	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	x	The Vec to finalise
[out]	err	The error code
[out]	error	The error string

Definition at line 6400 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petsc_vecdestroy().

Referenced by distributed_matrix_vector::distributed_vector_petsc_finalise().

subroutine, public cmisspetsc::petsc_vecgetarrayf90	(	type(petscvectype), intent(inout), target	x,
		real(dp), dimension(:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecGetArrayF90 routine.

Parameters

[in,out]	x	The vector to get the array of
	array	On exit, a pointer to the array of the vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6869 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecgetarrayreadf90	(	type(petscvectype), intent(inout), target	x,
		real(dp), dimension(:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecGetArrayReadF90 routine.

Parameters

[in,out]	x	The vector to get the array of
	array	On exit, a pointer to the array of the vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6904 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_data_get_dp(), and distributed_matrix_vector::distributed_vector_output().

subroutine, public cmisspetsc::petsc_vecgetlocalsize	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	n,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecGetLocalSize routine.

Parameters

[in,out]	x	The vector to get the local size of
[out]	n	On exit, the local size of the vector
[out]	err	The error code
[out]	error	The error string

Definition at line 6939 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecgetownershiprange	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	low,
		integer(intg), intent(out)	high,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecGetOwnershipRange routine.

Parameters

[in,out]	x	The vector to get the ownership range of
[out]	low	On exit, the low end of the range
[out]	high	On exit, the high end of the range
[out]	err	The error code
[out]	error	The error string

Definition at line 6970 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecgetsize	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	n,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecGetSize routine.

Parameters

[in,out]	x	The vector to get the size of
[out]	n	On exit, the size of the vector
[out]	err	The error code
[out]	error	The error string

Definition at line 7002 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecgetvalues	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(in)	n,
		integer(intg), dimension(:), intent(in)	indices,
		real(dp), dimension(:), intent(out)	values,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecGetValues routine.

Parameters

[in,out]	x	The vector to set the values for
[in]	n	The number of indicies to get
[in]	indices	The indices to get
[out]	values	On return, the values at the specified indicies
[out]	err	The error code
[out]	error	The error string

Definition at line 7033 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_values_get_dp(), distributed_matrix_vector::distributed_vector_values_get_dp1(), and solver_routines::solver_dae_bdf_integrate().

subroutine cmisspetsc::petsc_vecghostgetlocalform ( type(petscvectype), intent(inout)  g, type(petscvectype), intent(inout)  l, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc VecGhostGetLocalForm routine.

Parameters

[in,out]	g	The global form of the vector
[in,out]	l	On exit, the local form of the vector with ghosts
[out]	err	The error code
[out]	error	The error string

Definition at line 7066 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_vecghostrestorelocalform ( type(petscvectype), intent(inout)  g, type(petscvectype), intent(inout)  l, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc VecGhostRestoreLocalForm routine.

Parameters

[in,out]	g	The global form of the vector
[in,out]	l	The local form of the vector
[out]	err	The error code
[out]	error	The error string

Definition at line 7097 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_vecghostupdatebegin ( type(petscvectype), intent(inout)  x, intent(in)  insertMode, intent(in)  scatterMode, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc VecGhostUpdateBegin routine.

Parameters

[in,out]	x	The vector to begin the ghost update for
[out]	err	The error code
[out]	error	The error string

Definition at line 7128 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine cmisspetsc::petsc_vecghostupdateend ( type(petscvectype), intent(inout)  x, intent(in)  insertMode, intent(in)  scatterMode, integer(intg), intent(out)  err, type(varying_string), intent(out)  error  )

private

Buffer routine to the PETSc VecGhostUpdateEnd routine.

Parameters

[in,out]	x	The vector to end the ghost update for
[out]	err	The error code
[out]	error	The error string

Definition at line 7160 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecinitialise	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Parameters

[in,out]	x	The Vec to initialise
[out]	err	The error code
[out]	error	The error string

Definition at line 6426 of file cmiss_petsc.f90.

References base_routines::enters(), and base_routines::exits().

Referenced by distributed_matrix_vector::distributed_vector_override_set_off(), and distributed_matrix_vector::distributed_vector_petsc_initialise().

subroutine, public cmisspetsc::petsc_vecnorm	(	type(petscvectype), intent(in)	x,
		intent(in)	normType,
		real(dp), intent(out)	norm,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecNorm routine.

Parameters

[in]	x	The vector x to find the norm of
[out]	norm	On exit, the vector norm
[out]	err	The error code
[out]	error	The error string

Definition at line 7192 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecrestorearrayf90	(	type(petscvectype), intent(inout)	x,
		real(dp), dimension(:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecRestoreArrayF90 routine.

Parameters

[in,out]	x	The vector to restore the array of
	array	A pointer to the data to restore
[out]	err	The error code
[out]	error	The error string

Definition at line 7224 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecrestorearrayreadf90	(	type(petscvectype), intent(inout), target	x,
		real(dp), dimension(:), pointer	array,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecRestoreArrayReadF90 routine.

Parameters

[in,out]	x	The vector to restore the array for
	array	A pointer to the array of the vector to restore
[out]	err	The error code
[out]	error	The error string

Definition at line 7255 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_data_restore_dp(), and distributed_matrix_vector::distributed_vector_output().

subroutine, public cmisspetsc::petsc_vecscale	(	type(petscvectype), intent(inout)	x,
		real(dp), intent(in)	alpha,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecScale routine.

Parameters

[in,out]	x	The vector to scale
[in]	alpha	The scaling factor
[out]	err	The error code
[out]	error	The error string

Definition at line 7286 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_copy_dp().

subroutine, public cmisspetsc::petsc_vecset	(	type(petscvectype), intent(inout)	x,
		real(dp), intent(in)	VALUE,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecSet routine.

Parameters

[in,out]	x	The vector to set the value of
[in]	value	The value to set
[out]	err	The error code
[out]	error	The error string

Definition at line 7317 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_all_values_set_dp().

subroutine, public cmisspetsc::petsc_vecsetfromoptions	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecSetFromOptions routine.

Parameters

[in,out]	x	The vector to set the options for
[out]	err	The error code
[out]	error	The error string

Definition at line 7348 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecsetlocaltoglobalmapping	(	type(petscvectype), intent(inout)	x,
		type(petscislocaltogloabalmappingtype), intent(in)	isLocalToGlobalMapping,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecSetLocalToGlobalMapping routine.

Parameters

[in,out]	x	The vector to set the local to global mapping for
[in]	islocaltoglobalmapping	The local to global mapping context
[out]	err	The error code
[out]	error	The error string

Definition at line 7378 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecsetsizes	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(in)	localN,
		integer(intg), intent(in)	globalN,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecSetSizes routine.

Parameters

[in,out]	x	The vector to set the sizes of
[in]	localn	The number of local elements
[in]	globaln	The number of global elements
[out]	err	The error code
[out]	error	The error string

Definition at line 7409 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

subroutine, public cmisspetsc::petsc_vecsetvalues	(	type(petscvectype), intent(inout)	x,
		integer(intg), intent(in)	n,
		integer(intg), dimension(*), intent(in)	indices,
		real(dp), dimension(*), intent(in)	values,
		intent(in)	insertMode,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecSetValues routine.

Parameters

[in,out]	x	The vector to set the values for
[in]	n	The number of indicies
[in]	indices	The indices
[in]	values	The values to set
[out]	err	The error code
[out]	error	The error string

Definition at line 7441 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Referenced by distributed_matrix_vector::distributed_vector_values_add_dp(), distributed_matrix_vector::distributed_vector_values_add_dp1(), distributed_matrix_vector::distributed_vector_values_set_dp(), distributed_matrix_vector::distributed_vector_values_set_dp1(), and solver_routines::solver_dae_bdf_integrate().

subroutine, public cmisspetsc::petsc_vecview	(	type(petscvectype), intent(inout)	x,
		intent(in)	viewer,
		integer(intg), intent(out)	err,
		type(varying_string), intent(out)	error
	)

Buffer routine to the PETSc VecView routine.

Parameters

[in,out]	x	The vector to view
[out]	err	The error code
[out]	error	The error string

Definition at line 7509 of file cmiss_petsc.f90.

References base_routines::enters(), base_routines::exits(), and petschandleerror.

Variable Documentation

logical, save cmisspetsc::petschandleerror

private

Definition at line 395 of file cmiss_petsc.f90.

Referenced by petsc_errorhandlingsetoff(), petsc_errorhandlingseton(), petsc_finalise(), petsc_initialise(), petsc_iscoloringdestroy(), petsc_isdestroy(), petsc_islocaltoglobalmappingapply(), petsc_islocaltoglobalmappingapplyis(), petsc_islocaltoglobalmappingcreate(), petsc_islocaltoglobalmappingdestroy(), petsc_kspcreate(), petsc_kspdestroy(), petsc_kspgetconvergedreason(), petsc_kspgetiterationnumber(), petsc_kspgetpc(), petsc_kspgetresidualnorm(), petsc_kspgmressetrestart(), petsc_kspsetfromoptions(), petsc_kspsetinitialguessnonzero(), petsc_kspsetoperators(), petsc_kspsetreusepreconditioner(), petsc_kspsettolerances(), petsc_kspsettype(), petsc_kspsetup(), petsc_kspsolve(), petsc_logview(), petsc_matassemblybegin(), petsc_matassemblyend(), petsc_matcoloringapply(), petsc_matcoloringcreate(), petsc_matcoloringdestroy(), petsc_matcoloringsetfromoptions(), petsc_matcoloringsettype(), petsc_matcreate(), petsc_matcreateaij(), petsc_matcreatedense(), petsc_matcreateseqaij(), petsc_matcreateseqdense(), petsc_matdensegetarrayf90(), petsc_matdenserestorearrayf90(), petsc_matdestroy(), petsc_matfdcoloringcreate(), petsc_matfdcoloringdestroy(), petsc_matfdcoloringsetfromoptions(), petsc_matfdcoloringsetfunction(), petsc_matfdcoloringsetparameters(), petsc_matfdcoloringsetup(), petsc_matgetinfo(), petsc_matgetownershiprange(), petsc_matgetrow(), petsc_matgetvalues(), petsc_matmumpssetcntl(), petsc_matmumpsseticntl(), petsc_matrestorerow(), petsc_matseqaijgetarrayf90(), petsc_matseqaijgetmaxrownonzeros(), petsc_matseqaijrestorearrayf90(), petsc_matsetlocaltoglobalmapping(), petsc_matsetoption(), petsc_matsetsizes(), petsc_matsettype(), petsc_matsetvalue(), petsc_matsetvaluelocal(), petsc_matsetvalues(), petsc_matsetvalueslocal(), petsc_matview(), petsc_matzeroentries(), petsc_pcfactorgetmatrix(), petsc_pcfactorsetmatsolverpackage(), petsc_pcfactorsetupmatsolverpackage(), petsc_pcsetfromoptions(), petsc_pcsetreusepreconditioner(), petsc_pcsettype(), petsc_setvalueslocal(), petsc_snescomputejacobiandefault(), petsc_snescomputejacobiandefaultcolor(), petsc_snescreate(), petsc_snesdestroy(), petsc_snesgetapplicationcontext(), petsc_snesgetconvergedreason(), petsc_snesgetfunction(), petsc_snesgetiterationnumber(), petsc_snesgetjacobiansolver(), petsc_snesgetjacobianspecial(), petsc_snesgetksp(), petsc_snesgetlinesearch(), petsc_snesgetsolutionupdate(), petsc_sneslinesearchbtsetalpha(), petsc_sneslinesearchcomputenorms(), petsc_sneslinesearchgetnorms(), petsc_sneslinesearchgetvecs(), petsc_sneslinesearchsetcomputenorms(), petsc_sneslinesearchsetmonitor(), petsc_sneslinesearchsetnorms(), petsc_sneslinesearchsetorder(), petsc_sneslinesearchsettolerances(), petsc_sneslinesearchsettype(), petsc_snesmonitorset(), petsc_snesqnsetrestarttype(), petsc_snesqnsetscaletype(), petsc_snesqnsettype(), petsc_snessetapplicationcontext(), petsc_snessetconvergencetest(), petsc_snessetfromoptions(), petsc_snessetfunction(), petsc_snessetjacobianmatfdcoloring(), petsc_snessetjacobiansolver(), petsc_snessetksp(), petsc_snessetnormschedule(), petsc_snessettolerances(), petsc_snessettrustregiontolerance(), petsc_snessettype(), petsc_snessolve(), petsc_tscreate(), petsc_tsdestroy(), petsc_tsgetsolution(), petsc_tsmonitorset(), petsc_tssetduration(), petsc_tssetexactfinaltime(), petsc_tssetfromoptions(), petsc_tssetinitialtimestep(), petsc_tssetproblemtype(), petsc_tssetrhsfunction(), petsc_tssetsolution(), petsc_tssettimestep(), petsc_tssettype(), petsc_tssolve(), petsc_tsstep(), petsc_tssundialssettolerance(), petsc_tssundialssettype(), petsc_vecassemblybegin(), petsc_vecassemblyend(), petsc_veccopy(), petsc_veccreate(), petsc_veccreateghost(), petsc_veccreateghostwitharray(), petsc_veccreatempi(), petsc_veccreatempiwitharray(), petsc_veccreateseq(), petsc_veccreateseqwitharray(), petsc_vecdestroy(), petsc_vecdot(), petsc_vecduplicate(), petsc_vecgetarrayf90(), petsc_vecgetarrayreadf90(), petsc_vecgetlocalsize(), petsc_vecgetownershiprange(), petsc_vecgetsize(), petsc_vecgetvalues(), petsc_vecghostgetlocalform(), petsc_vecghostrestorelocalform(), petsc_vecghostupdatebegin(), petsc_vecghostupdateend(), petsc_vecnorm(), petsc_vecrestorearrayf90(), petsc_vecrestorearrayreadf90(), petsc_vecscale(), petsc_vecset(), petsc_vecsetfromoptions(), petsc_vecsetlocaltoglobalmapping(), petsc_vecsetsizes(), petsc_vecsetvalues(), and petsc_vecview().